Insertion junction: CLIP2.038619_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038619
Chromosome:chromosome 2
Location:6544939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389100 GOT1 (1 of 3) PF04178 - Got1/Sft2-like family (Got1); Got1, COPII vesicle component intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTATGGGATGGGGGCCGAGGCGTCGTGGAGTAGCAGGGCGAGCGGCGCC
Internal bar code:GATATCCCGTTATTATACTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGTATGCGCCCCAAATG
Suggested primer 2:TGATCCTCGAAGCATACGGC