Insertion junction: CLIP2.038633_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038633
Chromosome:chromosome 15
Location:592175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636550 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCCGCTGCTGTAGCCGCTGCATTCGTCGTCGTCGCGGCTACTGCCGC
Internal bar code:GGATGTTGGGGAGCTGGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1932
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGCTGTTGTTGTCCATG
Suggested primer 2:AAGAACCTGCACTACTCCGC