Insertion junction: CLIP2.038641_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038641
Chromosome:chromosome 4
Location:1867048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218100 FAP25 (1 of 1) PF11539 - Protein of unknown function (DUF3228) (DUF3228); Flagellar Associated Protein 25 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGACGCCGCGATGCAGCGCCGATGGCTTGGCCCCGGGACGGAGGGTC
Internal bar code:GGGGACAGACACAAAAACCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1857
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTATTTCGCACGCATGGTCC
Suggested primer 2:GAACAGATGGTGGGGACTGG