Insertion junction: CLIP2.038645_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038645
Chromosome:chromosome 8
Location:685308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360450 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGTGAGAGGGTGTGTGTGTAATATGTAGCGTGTACGTGTGTGTTGGA
Internal bar code:TTTTACGCACAGTTGCTCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4881
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGTGTGATTGCCGATGA
Suggested primer 2:AAACCGGCCCATGGTAAGAG