Insertion junction: CLIP2.038647_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038647
Chromosome:chromosome 6
Location:6823198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296300 SRR1 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACAAAGGACTTCCGGTATCAGTCGTGGATGCCATTTTGCGACCGGG
Internal bar code:TGCTGAGGGCATCATCTGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3618
LEAP-Seq percent confirming:99.2248
LEAP-Seq n confirming:128
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTTTCTTTGTTGCGCTC
Suggested primer 2:TTGAGCAAGCACGACAGCTA