Insertion junction: CLIP2.038651_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038651
Chromosome:chromosome 1
Location:3842916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025200 MMP4 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCGTACAGCTCATGTTCGGCATGCTCCTGTGACCAACCAAGATCAAT
Internal bar code:TATCCGGACCCATGCAGTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:90.5882
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCTAGCCAATTGGAATG
Suggested primer 2:GATGAGGATGGAGCTCGTGG