Insertion junction: CLIP2.038652_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038652
Chromosome:chromosome 7
Location:1150194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320900 (1 of 1) PTHR20883//PTHR20883:SF5 - PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGAAGTGGTGCTGACGGGGGACCGGGCCCGGGGCTCCGCGTGGGGGCC
Internal bar code:CTTTCAAGTGAGCGGTAGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1683
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGTTTTGGGGAAGTCCG
Suggested primer 2:CCGGCAAACGTGAACACAAT