Insertion junction: CLIP2.038655_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038655
Chromosome:chromosome 12
Location:8101563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552600 FKM9 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGTACAAAGAAGTGTAGCGGGTGGGGGAGGCACCAGGCGGTGGTGTG
Internal bar code:TCGGGCCGTACTCTTGCGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2087
LEAP-Seq percent confirming:89.7059
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTTTCGTTTCCGTTGCT
Suggested primer 2:GTGTGTGTGTGTGTGTGTCG