Insertion junction: CLIP2.038657_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038657
Chromosome:chromosome 16
Location:6084160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677600 SOM5 S-adenosyl-L-methionine-dependent O-methyltransferase; (1 of 4) PTHR13600//PTHR13600:SF12 - LEUCINE CARBOXYL METHYLTRANSFERASE // LEUCINE CARBOXYL METHYLTRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCCGCACACGGAGTGTGTAGAATCTTCTTCCTCGACTGTTTACATA
Internal bar code:TGGATCCTATTGTCGTTAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3205
LEAP-Seq percent confirming:82.4324
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGCTGGTGAGATCTGC
Suggested primer 2:CTTGGCGCTGGTGAAGTAGA