Insertion junction: CLIP2.038663_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038663
Chromosome:chromosome 9
Location:645608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404904 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCACAGCAGGCCACTAACCCGTACATGTACGACGTCAGTCCTTACGC
Internal bar code:TCTTTTTAAGGCTATACTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1280
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTGGTGTGGTGCCGTAT
Suggested primer 2:TGATTGGTTTCGGTGCGAGA