Insertion junction: CLIP2.038663_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038663
Chromosome:chromosome 9
Location:645615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404904 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCCCTAGAGCCTGAGCAGCAGCATTGGCGGCGGCTGCAAATCCTCCA
Internal bar code:TCTTTTTAAGGCTATACTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1981
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTGGTTTCGGTGCGAGA
Suggested primer 2:CTCTTGGTGTGGTGCCGTAT