Insertion junction: CLIP2.038665_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038665
Chromosome:chromosome 12
Location:2253882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508644 HDG1 (1 of 1) PTHR11850//PTHR11850:SF132 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 11; BELL-related homeodomain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGCGGGCACGCCTCCGCCGCCGCTGCAGCTTCAGGCCGACACGGCTG
Internal bar code:CCTCTATTCTTCCAAAGTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCGATGGTGCTGATAA
Suggested primer 2:CCAGCAACAACACTGACAGC