Insertion junction: CLIP2.038665_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038665
Chromosome:chromosome 12
Location:2253883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508644 HDG1 (1 of 1) PTHR11850//PTHR11850:SF132 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 11; BELL-related homeodomain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCATCCAGTGACGCCAGCAACGGCGTCGACAGCATATCCGCCATCACA
Internal bar code:CTGGCACACTGCGTTGAGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3107
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAACAACACTGACAGC
Suggested primer 2:CCTGCCGATGGTGCTGATAA