Insertion junction: CLIP2.038672_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038672
Chromosome:chromosome 2
Location:5281569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112750 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGTGCAGCTCTGCAACGTCGTGCGCCTGTGTGCCATCACTGCCCCCT
Internal bar code:TGTAATTAGTGGAGGAGTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3546
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGCTAATGCAGGGACGC
Suggested primer 2:TAGTTCGTGTCGGCAAGGTC