Insertion junction: CLIP2.038677_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038677
Chromosome:chromosome 8
Location:494183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359200 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTGCCGGCAGGTTGGCCCCCATCTCTCCCGCCTGGTCGCCTCGGCGAC
Internal bar code:CGGGTCCAGTGTTTTCGACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1886
LEAP-Seq percent confirming:67.0886
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGGCAACGTCGTAGCTG
Suggested primer 2:TGACACTGTCACCCCGATTG