Insertion junction: CLIP2.038698_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038698
Chromosome:chromosome 1
Location:5100629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035600 MSC2 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACACACACACACACACACACACACACACACACACACATTCA
Internal bar code:ATATGACGAGCGACCGCTACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2442
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTCAGTAGGCACACAG
Suggested primer 2:CTGTAGAGGCAAGGGTTGGG