Insertion junction: CLIP2.038701_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038701
Chromosome:chromosome 17
Location:2353211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713800 (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGGAAAGGGCTTCCCAGGCCACGTCATAGTGGCACATGAAGCTATGG
Internal bar code:GAGCTTGGATATTGTTTAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2371
LEAP-Seq percent confirming:82.5
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGACTCGCAATCGTATG
Suggested primer 2:CTTCAATGCACCCTCCCCAT