Insertion junction: CLIP2.038704_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038704
Chromosome:chromosome 12
Location:4847903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523600 (1 of 3) PTHR13367//PTHR13367:SF8 - TUMOR NECROSIS FACTOR-RELATED // OTU DOMAIN-CONTAINING PROTEIN 7B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGCGGACGGGCGGCTCTACTCCATCAACATCCTGGACGGGACTGTG
Internal bar code:GTGTCTGTGACAGTTTCGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1987
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGACGCTGAGGAAGGTA
Suggested primer 2:TCGACAGCAACATCAGCACT