Insertion junction: CLIP2.038705_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038705
Chromosome:chromosome 5
Location:2175065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237283 (1 of 7) IPR020850 - GTPase effector domain, GED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTCCGCGCATGGCAAGCGCTTATGGCCGCTGGGAGATGGAGCGGTCA
Internal bar code:TTCGGGGACTGGGACAAGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3575
LEAP-Seq percent confirming:40.678
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCAAGCTTAATGGGCAT
Suggested primer 2:CACGGCATCGATGAGCTTTG