Insertion junction: CLIP2.038707_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038707
Chromosome:chromosome 7
Location:2405265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328800 NSG13 (1 of 8) PF00514 - Armadillo/beta-catenin-like repeat (Arm); Protein expressed during nitrogen-starved gametogenesis intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAACCGGGGGTTCGAGACCCGGGCCTAACGTGCGCTTGGCTGCACTG
Internal bar code:ACATATGGTGTTCGAGGTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1041
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCCGGAAACACCTGTAT
Suggested primer 2:CTCCTTGCCTTGGCACCATA