Insertion junction: CLIP2.038722_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038722
Chromosome:chromosome 4
Location:425210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217917 (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGAAGATGTTTTTGATGTCGTAGTCGGAGCGCGAGCGGAAGTGCTTG
Internal bar code:ACCACGTTATAAACGCTCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3252
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCGCCATTTGAAAGTG
Suggested primer 2:ACGTCTCTCAGGATGACCCA