Insertion junction: CLIP2.038732_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038732
Chromosome:chromosome 12
Location:6527697
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g537900 (1 of 1) PF11927 - Protein of unknown function (DUF3445) (DUF3445) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATGGGCATGCCCGACCGGCCCGAAACATCCAAGTTGTCCATGATCTG
Internal bar code:TGGTGTAGTGTAGAGTCGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2098
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACTACGGTTTCCACGG
Suggested primer 2:GATGTTGCGGCGATAGGAGA