Insertion junction: CLIP2.038733_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038733
Chromosome:chromosome 8
Location:680434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360450 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGTTTCATAATCATCTGCTGCTTATGTGAAATTTTTGCATACTTGTA
Internal bar code:TAAATTGACTAGTGGTTTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATCATAGGACAGGCGG
Suggested primer 2:CTTTCGTGCGCCTTGATCAG