Insertion junction: CLIP2.038737_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038737
Chromosome:chromosome 13
Location:1122880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569400 TAUD1 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAATTGCAACTGCAAATGGAACGCAATGCCCAGCCCCTGTGCCCCACC
Internal bar code:GACGAGATTATATTATCCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2702
LEAP-Seq percent confirming:90.099
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTGACTCGTGGTTCTT
Suggested primer 2:ATTTTGCGGCGTGGAGTTTC