Insertion junction: CLIP2.038737_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038737
Chromosome:chromosome 13
Location:1122884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569400 TAUD1 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTTGGATTGAACGGGGGCCCCTAGGGAGTCACTGGGGCTGCGCTTC
Internal bar code:AAGAACGTTGTCAGCATGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3261
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTTGCGGCGTGGAGTTTC
Suggested primer 2:CTGGCTGACTCGTGGTTCTT