Insertion junction: CLIP2.038740_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038740
Chromosome:chromosome 7
Location:3318491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334750 PPP30 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTGGATATTCACGTGTGCGTGCCACCAGTAATGCGCCTTCCAACCTT
Internal bar code:TTAACTGATCACGTATTAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5682
LEAP-Seq percent confirming:87.6923
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTAGTTGTTGATGGCGGG
Suggested primer 2:CAGTTCAGGGCCTGGAAGAG