Insertion junction: CLIP2.038740_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038740
Chromosome:chromosome 7
Location:3318497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334750 PPP30 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTGAATCCACAAACTGCATCACTTGCATTAGCCCTCTAACGAACTTC
Internal bar code:TTAACTGATCACGTATTAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTCAGGGCCTGGAAGAG
Suggested primer 2:AGGTAGTTGTTGATGGCGGG