Insertion junction: CLIP2.038748_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038748
Chromosome:chromosome 10
Location:1382728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427850 (1 of 1) IPR000014//IPR000104//IPR013767 - PAS domain // Antifreeze protein, type I // PAS fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGAAGTGGTGCTACAGGCAAGTGCGCTCCATGCGAACGCGTCCTTCC
Internal bar code:TGTCGTGGGCAATTAACGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1420
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGACATCTCGTAGCCAGTCC
Suggested primer 2:CAGTCCCACCTTCCCTTGTC