Insertion junction: CLIP2.038748_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038748
Chromosome:chromosome 10
Location:1382753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427850 (1 of 1) IPR000014//IPR000104//IPR013767 - PAS domain // Antifreeze protein, type I // PAS fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTTCTCCCGACATCCCAAGCTCACGAATACGCACACACGGTACACAT
Internal bar code:TGTCGTGGGCAATTAACGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3751
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCCCACCTTCCCTTGTC
Suggested primer 2:CGACATCTCGTAGCCAGTCC