Insertion junction: CLIP2.038749_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038749
Chromosome:chromosome 10
Location:822278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423250 MDN2,MDH2 Malate dehydrogenase 2; (1 of 1) PTHR11540//PTHR11540:SF27 - MALATE AND LACTATE DEHYDROGENASE // MALATE DEHYDROGENASE, GLYOXYSOMAL-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCGAAATAGGTGGGGGAGGGATGGTGGGGGCGGCACGTACCACACA
Internal bar code:TGCGCTTAGAGTGGGGTGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTTGCCAACCTGCCTTG
Suggested primer 2:TGTGGTAGAGGGAGGATGGG