Insertion junction: CLIP2.038753_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038753
Chromosome:chromosome 11
Location:1758411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468050 VIPP2 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGCATAAAACTTCCCATACTTTCATCTTTTTCGTTCTTCCCTCCGCC
Internal bar code:AACCGTCAATTATGGGTTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTTCCGGGGGAAAATGA
Suggested primer 2:TCACGGTATCTGCATGCTCC