Insertion junction: CLIP2.038754_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038754
Chromosome:chromosome 2
Location:3106535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096150 MSD1,SODA (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGTTGTTGCGGCCGGAACGGAGCCGGCATGCATTTGCACATACAAA
Internal bar code:GAGCTCTCGTCTAGCTAAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCAGCGAACCCATAACCA
Suggested primer 2:GGGAGAGGGAGGGGTTACAT