Insertion junction: CLIP2.038761_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038761
Chromosome:chromosome 4
Location:2802653
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223900 (1 of 2) K09313 - homeobox protein cut-like (CUTL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAATGCAGAAAGAGAGGTGGATGATGTGCGCAGCCAGCAAGGCCCGG
Internal bar code:ACGTCTCGCGGGGAATTTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:828
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCCACAACCTCAAAACC
Suggested primer 2:GAGAAGAGTGAGTGGTGGGC