Insertion junction: CLIP2.038767_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038767
Chromosome:chromosome 7
Location:1048377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319800 (1 of 1) IPR000104//IPR009148 - Antifreeze protein, type I // Streptococcal non-M secreted SibA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTTTCGGCATCAAGCTGTGAAGCTGTCCGGACAGCGCGGCTACCGCA
Internal bar code:TGCCCTGAGGGGACTGCTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4954
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCAGGCCGTTTGTTCAG
Suggested primer 2:GCGACATCCGACTAGAGTGG