Insertion junction: CLIP2.038769_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038769
Chromosome:chromosome 17
Location:4052746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728650 FAP196 (1 of 2) PTHR13720//PTHR13720:SF14 - WD-40 REPEAT PROTEIN // WD REPEAT-CONTAINING PROTEIN 16; Flagellar Associated Protein 196 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTAGTTCGCGTCGTGTGTGTTCGTGGGTTTGCAGTTTACAAGTACGA
Internal bar code:CGATTTGAACGATCAGTTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:56.5217
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCTTTGTGCCCGGTGAG
Suggested primer 2:TAGTGGAGGACGATGGAGGG