Insertion junction: CLIP2.038781_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038781
Chromosome:chromosome 13
Location:1967803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576500 (1 of 1) PTHR35698//PTHR35698:SF1 - FAMILY NOT NAMED // DNA-BINDING PROTEIN RHL1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTGTGCGCGTTCTGCGTGAGGCCAGTCGGGCTCAATGCGCGCAACCT
Internal bar code:TTTTCTGTTATCTAGTACAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1742
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCTCAGCTCCTTGTAGC
Suggested primer 2:GCCGAGGAAAACCCAGAAGA