Insertion junction: CLIP2.038783_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038783
Chromosome:chromosome 3
Location:6442860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193200 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGCCAGTTACGTCGCCGAGCCCCACGTTTGGTGGTCAGCATCACGG
Internal bar code:TCTCATAAGCCATAGGATGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACACAGTCTGGTCCGCC
Suggested primer 2:TCATCACCACGGACATGAGC