Insertion junction: CLIP2.038783_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038783
Chromosome:chromosome 3
Location:6442863
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193200 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGAGCCGCCACCGCCACGACCGACCATGCCAGCACCCAATCCCATGC
Internal bar code:TAATCAAGCGATCGATACACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4975
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCACCACGGACATGAGC
Suggested primer 2:TTTACACAGTCTGGTCCGCC