Insertion junction: CLIP2.038790_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038790
Chromosome:chromosome 1
Location:862661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004850 TXE1 Transcription elongation factor; (1 of 1) PTHR30195//PTHR30195:SF13 - TYPE I SITE-SPECIFIC DEOXYRIBONUCLEASE PROTEIN SUBUNIT M AND R // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCTCCTCAAGAAGCCAGCTCCACATCGCCAGCCCCGGTGCACCCGGC
Internal bar code:ACATTTAATTGTGTATCCACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3429
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGGCAAAAGCAACAGG
Suggested primer 2:ATCACTGCGATACGGCTCTG