Insertion junction: CLIP2.038792_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038792
Chromosome:chromosome 16
Location:7668184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685613 (1 of 1) PF02689//PF05970 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAAAGGAGTTTCCCGCCCTACCCAGGCAGGGGACAGGGCATGGGAGCG
Internal bar code:TGAGTAGGCTTCTGGCCGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:858
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAAGGGAAATGGGCTCCG
Suggested primer 2:GTGGCGGAGAAAAAGCTGTG