Insertion junction: CLIP2.038800_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038800
Chromosome:chromosome 17
Location:1645701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707750 (1 of 1) PTHR31040//PTHR31040:SF1 - FAMILY NOT NAMED // NURIM CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAGGTCAGCACCGCACATGCCGCACAGGTGACGAATAGGGTGCGCTC
Internal bar code:ATAGTCAGGGGTTTACCAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2613
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGACGTGCTTCAACTGCC
Suggested primer 2:AGTACACGTTGAGCACCAGG