Insertion junction: CLIP2.038803_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038803
Chromosome:chromosome 3
Location:1794659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154000 ABCA1A,ABCA1 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold; ABC transporter 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGCTATTGGGAATGCAGTTACAGACATTGGCCAGGCCACCGGCCTG
Internal bar code:AGTTAGACGGGCGATGGTACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1308
LEAP-Seq percent confirming:77.3585
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTCATACACGTTGGCG
Suggested primer 2:GAAGTTATCTGCTTGCGCGG