Insertion junction: CLIP2.038804_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038804
Chromosome:chromosome 9
Location:511542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748847 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCAGGACAGCACGCCGCGTTGCGATCCACAGACGTCCGCGTGTTGCA
Internal bar code:AACTCTGCCAGCAGAGAGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1520
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGGAGTATGTAGAGTGGC
Suggested primer 2:TAAGCACACGGTACACCACC