Insertion junction: CLIP2.038813_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038813
Chromosome:chromosome 6
Location:2035189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800622 (1 of 8) PF06011 - Transient receptor potential (TRP) ion channel (TRP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACAACCCGCGTAATGCTGCACTCCCCCGCACACACAGGCACGGCCTCC
Internal bar code:CTGGTCGAGTTAAAAGCTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3686
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACCTTCCTGCACGGTAC
Suggested primer 2:ACAGCCTACACAAACTCGGG