Insertion junction: CLIP2.038820_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038820
Chromosome:chromosome 3
Location:887368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146507 SPT2 (1 of 2) 2.3.1.50 - Serine C-palmitoyltransferase; Serine palmitoyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATGCCTGACCTAGTAAGAAACTGCCCAAACACCCGAGTCAACACACG
Internal bar code:TCCGCATAGGTAGTAATGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCGCAGTTAGAACATGC
Suggested primer 2:TCTGCAGCACCTTCTCCTTG