Insertion junction: CLIP2.038822_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038822
Chromosome:chromosome 11
Location:1054678
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467666 LCI13,GT90F43,GT90-43 Low-CO2-inducible 13; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGAGGAGGCTCATCCGTTGGAGCCAGCAGAGAGGGGGCGGAGGGCA
Internal bar code:TGACCCTCGACAGTTCATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1934
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTATCACCACGGCATCC
Suggested primer 2:GGCGTATCCTGTGCTCTCTC