Insertion junction: CLIP2.038835_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038835
Chromosome:chromosome 3
Location:3920014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGCAACCACATCCTCCCCTGGCGCGGCCGAGGACGCTAGCTCGGGCC
Internal bar code:CATTTCCCAAGTCTTGCTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:430
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTTTGCGCGTTGCTAAA
Suggested primer 2:GCAGCAGCAGTAGTAGCAGT