Insertion junction: CLIP2.038839_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038839
Chromosome:chromosome 7
Location:1012669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319600 FAE3 (1 of 3) K15397 - 3-ketoacyl-CoA synthase (KCS); Putative 3-keto-acyl-CoA synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCACGCACAGGCCCTTCGCGACATTCACGAGGTGCATGACGCCTGGG
Internal bar code:TAGGGAAAGGGATCGCGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3192
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTTCCCCTCATCTCTCC
Suggested primer 2:TGGTATGCACTTGCTCACGT