Insertion junction: CLIP2.038840_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038840
Chromosome:chromosome 6
Location:8124108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305650 PAO6,Tic55-like4,TIC55-4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTCCCTGCTCCTGATGATACGGTAATCACTTTGCTTCATTCGCCCT
Internal bar code:CAGCATTGATATTTCGTAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1423
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATGAGGAGACTGCGGG
Suggested primer 2:ATGCGATCACTCCGTTCTCC