Insertion junction: CLIP2.038845_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038845
Chromosome:chromosome 1
Location:1628889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008850 HLM2 (1 of 1) PF12931//PF12932 - Sec23-binding domain of Sec16 (Sec16_C) // Vesicle coat trafficking protein Sec16 mid-region (Sec16); Histone-lysine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGAGGAGCCGGAGGAACCGGAGGAGCCGGAGGAGGTGGTGGAGGAGG
Internal bar code:GGGGGTCGTGGTTAGTAAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACTGCCCACCATAGTG
Suggested primer 2:GCTTTTTCGCTGAGTCACCG